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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Javy Lopez | 20th | Tied for 8th | 23rd | |
| First Basemen | Fred McGriff | 19th | Tied for 4th | 21st | |
| Second Basemen | Mark Lemke | 26th | Tied for 8th | 26th | |
| Third Basemen | Chipper Jones | 10th | Tied for 2nd | 11th | |
| Shortstops | Mike Mordecai | 17th | Tied for 7th | 21st | |
| Left Fielders | Ryan Klesko | 7th | Tied for 8th | 12th | |
| Center Fielders | Mike Kelly | 30th | Tied for 9th | 30th | |
| Right Fielders | David Justice | 13th | Tied for 3rd | 14th | |
| Starting Pitchers | Greg Maddux | 1st | Jason Schmidt | 5th | 2nd |
| Relievers | Pedro Borbon | 2nd | Brad Clontz | 3rd | 2nd |
| Closers | Mark Wohlers | 4th | Brad Clontz | 3rd | 1st |
